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1

Intrinsic conformational dynamics of the HIV-1 genomic RNA 5′UTR

Brigham, Benjamin S., Kitzrow, Jonathan P., Reyes, Joshua-Paolo C., Musier-Forsyth, Karin, Munro, James B.

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

Language:

english

File:

PDF, 1.77 MB

english, 2019

2

New Structure Sheds Light on Selective HIV-1 Genomic RNA Packaging

Olson, Erik, Cantara, William, Musier-Forsyth, Karin

Journal:

Year:

2015

Language:

english

File:

PDF, 271 KB

english, 2015

3

Functional Equivalence of Retroviral MA Domains in Facilitating Psi RNA Binding Specificity by Gag

Rye-McCurdy, Tiffiny, Olson, Erik, Liu, Shuohui, Binkley, Christiana, Reyes, Joshua-Paolo, Thompson, Brian, Flanagan, John, Parent, Leslie, Musier-Forsyth, Karin

Journal:

Year:

2016

Language:

english

File:

PDF, 1.60 MB

english, 2016

4

Does Active Learning through an Antisense Jigsaw Make Sense?

Seetharaman, Mahadevan, Musier-Forsyth, Karin

Journal:

Journal of Chemical Education

Year:

2003

Language:

english

File:

PDF, 98 KB

english, 2003

5

Role of HIV-1 nucleocapsid protein in HIV-1 reverse transcription

Levin, Judith G, Mitra, Mithun, Mascarenhas, Anjali, Musier-Forsyth, Karin

Journal:

Year:

2010

Language:

english

File:

PDF, 3.91 MB

english, 2010

6

Sequence-Dependent Conformational Differences of Small RNAs Revealed by Native Gel Electrophoresis

Penny J. Beuning, Michael R. Tessmer, Christoph G. Baumann, Deborah A. Kallick, Karin Musier-Forsyth

Journal:

Analytical Biochemistry

Year:

1999

Language:

english

File:

PDF, 159 KB

english, 1999

7

The capsid protein of human immunodeficiency virus: interactions of HIV-1 capsid with host protein factors

Anjali P. Mascarenhas, Karin Musier-Forsyth

Journal:

Year:

2009

Language:

english

File:

PDF, 443 KB

english, 2009

8

Role of Coupled Dynamics in the Catalytic Activity of Prokaryotic-like Prolyl-tRNA Synthetases

Sanford, Brianne, Cao, Bach, Johnson, James M., Zimmerman, Kurt, Strom, Alexander M., Mueller, Robyn M., Bhattacharyya, Sudeep, Musier-Forsyth, Karin, Hati, Sanchita

Journal:

Year:

2012

Language:

english

File:

PDF, 583 KB

english, 2012

9

Nucleic Acid Chaperone Activity of Wild Type and Mutant FIV Nucleocapsid Proteins

Wu, Hao, McCauley, Micah J., Gorelick, Robert J., Rouzina, Ioulia, Musier-Forsyth, Karin, Williams, Mark C.

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 37 KB

english, 2012

10

The Nucleocapsid Protein Specifically Anneals tRNALys-3onto a Noncomplementary Primer Binding site within the HIV-1 RNA Genome in vitro

Barden Chan and Karin Musier-Forsyth

Journal:

Proceedings of the National Academy of Sciences

Year:

1997

Language:

english

File:

PDF, 1.53 MB

english, 1997

11

Escherichia coli Proline tRNA Synthetase Is Sensitive to Changes in the Core Region of tRNAPro

Liu, Hongjian, Musier-Forsyth, Karin

Journal:

Year:

1994

Language:

english

File:

PDF, 2.88 MB

english, 1994

12

Stoichiometry of triple-sieve tRNA editing complex ensures fidelity of aminoacyl-tRNA formation

Chen, Lin, Tanimoto, Akiko, So, Byung Ran, Bakhtina, Marina, Magliery, Thomas J, Wysocki, Vicki H, Musier-Forsyth, Karin

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 5.09 MB

english, 2018

13

Hairpin RNA-induced conformational change of a eukaryotic-specific lysyl-tRNA synthetase extension and role of adjacentÂ anticodon-binding domain

Liu, Sheng, Refaei, Maryanne, Liu, Shuohui, Decker, Aaron, Hinerman, Jennifer M, Herr, Andrew B., Howell, Mike, Musier-Forsyth, Karin, Tsang, Pearl

Journal:

Journal of Biological Chemistry

Year:

2020

File:

PDF, 6.52 MB

2020

14

Functional contacts of a transfer RNA synthetase with 2′-hydroxyl groups in the RNA minor groove

Musier-Forsyth, Karin, Schimmel, Paul

Journal:

Year:

1992

File:

PDF, 452 KB

1992

15

Fluorescence Fluctuation Spectroscopy on Viral-Like Particles Reveals Variable Gag Stoichiometry

Chen, Yan, Wu, Bin, Musier-Forsyth, Karin, Mansky, Louis M., Mueller, Joachim D.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 516 KB

english, 2009

16

Oligomerization of HIV-1 Restriction Factor APOBEC3G Transforms it from a Fast Enzyme to a Slow Nucleic Acid Binding Protein

Chaurasiya, Kathy R., Geertsema, Hylkje, Qualley, Dominic F., Wu, Tiyun, Iwatani, Yasumasa, Chan, Denise, Hertz, Amber, Levin, Judith G., Musier-Forsyth, Karin, Rouzina, Ioulia, Williams, Mark C.

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 37 KB

english, 2012

17

Sequence-Encoded Self-Assembly of Multiple-Nanocomponent Arrays by 2D DNA Scaffolding

Pinto, Yariv Y., Le, John D., Seeman, Nadrian C., Musier-Forsyth, Karin, Taton, T. Andrew, Kiehl, Richard A.

Journal:

Year:

2005

Language:

english

File:

PDF, 650 KB

english, 2005

18

Isothermal amplification of long DNA segments by quadruplex priming amplification

Lomidze, Levan, Williford, Tyler H., Musier-Forsyth, Karin, Kankia, Besik

Journal:

Analytical Methods

Year:

2018

Language:

english

File:

PDF, 740 KB

english, 2018

19

Analysis of Discrete Local Variability and Structural Covariance in Macromolecular Assemblies using Cryo-EM and Focused Classification

Zhang, Cheng, Cantara, William, Jeon, Youngmin, Musier-Forsyth, Karin, Grigorieff, Nikolaus, Lyumkis, Dmitry

Journal:

Ultramicroscopy

Year:

2018

Language:

english

File:

PDF, 1.41 MB

english, 2018

20

Use of terbium as a probe of tRNA tertiary structure and folding

HARGITTAI, MICHELE R. SEFFERNICK, MUSIER-FORSYTH, KARIN

Journal:

Year:

2000

Language:

english

File:

PDF, 2.35 MB

english, 2000

21

Functional guanine–arginine interaction between tRNAPro and prolyl-tRNA synthetase that couples binding and catalysis

Brian Burke, Songon An, Karin Musier-Forsyth

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2008

Language:

english

File:

PDF, 215 KB

english, 2008

22

Diverse interactions of retroviral Gag proteins with RNAs

Alan Rein, Siddhartha A.K. Datta, Christopher P. Jones, Karin Musier-Forsyth

Journal:

Trends in Biochemical Sciences

Year:

2011

Language:

english

File:

PDF, 1.83 MB

english, 2011

23

Small RNA helices as substrates for aminoacylation and their relationship to charging of transfer RNAs

Christopher FRANCKLYN, Karin MUSIER-FORSYTH, Paul SCHIMMEL

Journal:

Year:

1992

Language:

english

File:

PDF, 866 KB

english, 1992

24

Mechanistic Insights into the Kinetics of HIV-1 Nucleocapsid Protein-facilitated tRNA Annealing to the Primer Binding Site

Michele R.S. Hargittai, Robert J. Gorelick, Ioulia Rouzina, Karin Musier-Forsyth

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 1.07 MB

english, 2004

25

Specific Atomic Groups and RNA Helix Geometry in Acceptor Stem Recognition by a tRNA Synthetase

Penny J. Beuning, Fan Yang, Paul Schimmel and Karin Musier-Forsyth

Journal:

Proceedings of the National Academy of Sciences

Year:

1997

Language:

english

File:

PDF, 755 KB

english, 1997

26

Single-Molecule Fluorescence Using Nucleotide Analogs: A Proof-of-Principle

Alemán, Elvin A., de Silva, Chamaree, Patrick, Eric M., Musier-Forsyth, Karin, Rueda, David

Journal:

The Journal of Physical Chemistry Letters

Year:

2014

Language:

english

File:

PDF, 1.59 MB

english, 2014

27

Capillary Electrophoretic Separation of Nuclei Released from Single Cells

Gunasekera, Nilhan, Olson, Karen J., Musier-Forsyth, Karin, Arriaga, Edgar A.

Journal:

Analytical Chemistry

Year:

2004

Language:

english

File:

PDF, 162 KB

english, 2004

28

Enzymatic Aminoacylation of Single-Stranded RNA with an RNA Cofactor

Karin Musier-Forsyth, Stephen Scaringe, Nassim Usman and Paul Schimmel

Journal:

Proceedings of the National Academy of Sciences

Year:

1991

Language:

english

File:

PDF, 892 KB

english, 1991

29

Transfer RNA recognition by aminoacyl-tRNA synthetases

Penny J. Beuning, Karin Musier-Forsyth

Journal:

Year:

1999

Language:

english

File:

PDF, 296 KB

english, 1999

30

Rapid Kinetics of Protein–Nucleic Acid Interaction is a Major Component of HIV-1 Nucleocapsid Protein’s Nucleic Acid Chaperone Function

Margareta Cruceanu, Robert J. Gorelick, Karin Musier-Forsyth, Ioulia Rouzina, Mark C. Williams

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 787 KB

english, 2006

31

Comparative Analysis of RNA/Protein Dynamics for the Arginine-Rich-Binding Motif and Zinc-Finger-Binding Motif Proteins Encoded by HIV-1

Wang, Hui, Ma, Xiaojing, Yeh, Yu-Shan, Zhu, Yongjin, Daugherty, Matthew D., Frankel, Alan D., Musier-Forsyth, Karin, Barbara, Paul F.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 679 KB

english, 2010

32

Review of Nagai and Mattaj, editors: RNA-Protein Interactions

Musier-Forsyth, Karin

Journal:

Biophysical Journal

Year:

1996

Language:

english

File:

PDF, 126 KB

english, 1996

33

Nucleocapsid Protein Locally Melts The Iib Region Of Hiv-1 Rre Rna, But Rev Protein Does Not: A Single-molecule Spectroscopic Study

Yeh, Yu-shan, Wang, Hui, Barbara, Paul F., Daugherty, Matthew D., Frankel, Alan D., Musier-Forsyth, Karin

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 80 KB

english, 2009

34

Structural biology: Wobble puts RNA on target

Vargas-Rodriguez, Oscar, Musier-Forsyth, Karin

Journal:

Year:

2014

Language:

english

File:

PDF, 863 KB

english, 2014

35

Progress and outlook in structural biology of large viral RNAs

Cantara, William A., Olson, Erik D., Musier-Forsyth, Karin

Journal:

Year:

2014

Language:

english

File:

PDF, 1.56 MB

english, 2014

36

Substrate and Enzyme Functional Groups Contribute to Translational Quality Control by Bacterial Prolyl-tRNA Synthetase

Kumar, Sandeep, Das, Mom, Hadad, Christopher M., Musier-Forsyth, Karin

Journal:

Journal of Physical Chemistry B

Year:

2012

Language:

english

File:

PDF, 4.72 MB

english, 2012

37

HIV-1 NC Protein Modifies Opening and Closing Kinetics of TAR RNA Hairpin

McCauley, Micah J., Rouzina, Ioulia, Hoadley, Kelly, Musier-Forsyth, Karin, Williams, Mark C.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 38 KB

english, 2011

38

Isothermal quadruplex priming amplification for DNA-based diagnostics

Taylor, Adam, Joseph, Anupama, Okyere, Robert, Gogichaishvili, Shota, Musier-Forsyth, Karin, Kankia, Besik

Journal:

Biophysical Chemistry

Year:

2013

Language:

english

File:

PDF, 562 KB

english, 2013

39

Atomic Determinants for Aminoacylation of RNA Minihelices and Relationship to Genetic Code

Musier-Forsyth, Karin, Schimmel, Paul

Journal:

Accounts of Chemical Research

Year:

1999

Language:

english

File:

PDF, 203 KB

english, 1999

40

G−1:C73 Recognition by an Arginine Cluster in the Active Site of Escherichia coli Histidyl-tRNA Synthetase †

Connolly, Susan A., Rosen, Abbey E., Musier-Forsyth, Karin, Francklyn, Christopher S.

Journal:

Year:

2004

Language:

english

File:

PDF, 169 KB

english, 2004

41

10.1038/75816

Musier-Forsyth, Karin, Beuning, Penny J.

Journal:

Natural Structural Biology

Year:

2000

Language:

english

File:

PDF, 159 KB

english, 2000

42

Targeted binding of nucleocapsid protein transforms the folding landscape of HIV-1 TAR RNA

McCauley, Micah J., Rouzina, Ioulia, Manthei, Kelly A., Gorelick, Robert J., Musier-Forsyth, Karin, Williams, Mark C.

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 849 KB

english, 2015

43

Double mimicry evades tRNA synthetase editing by toxic vegetable-sourced non-proteinogenic amino acid

Song, Youngzee, Zhou, Huihao, Vo, My-Nuong, Shi, Yi, Nawaz, Mir Hussain, Vargas-Rodriguez, Oscar, Diedrich, Jolene K., Yates, John R., Kishi, Shuji, Musier-Forsyth, Karin, Schimmel, Paul

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 1.21 MB

english, 2017

44

SAMHD1 Impairs HIV-1 Gene Expression and Negatively Modulates Reactivation of Viral Latency in CD4 + T-cells

Antonucci, Jenna M., Kim, Sun Hee, St. Gelais, Corine, Bonifati, Serena, Li, Tai-Wei, Buzovetsky, Olga, Knecht, Kirsten M., Duchon, Alice A., Xiong, Yong, Musier-Forsyth, Karin, Wu, Li

Journal:

Journal of Virology

Year:

2018

Language:

english

File:

PDF, 3.25 MB

english, 2018

45

'Distorted' RNA helix recognition

Schimmel, Paul, Musier-Forsyth, Karin

Journal:

Year:

1996

File:

PDF, 289 KB

1996

46

tRNA research: still going strong after four decades!

Karin Musier-Forsyth

Journal:

Trends in Biochemical Sciences

Year:

1996

Language:

english

File:

PDF, 147 KB

english, 1996

47

Preferential interaction of human immunodeficiency virus reverse transcriptase with two regions of primer tRNALys as evidenced by footprinting studies and inhibition with synthetic oligoribonucleotides

Leila Sarih-Cottin, Bruno Bordier, Karin Musier-Forsyth, Marie-Line Andreola, Philip J. Barr, Simon Litvak

Journal:

Journal of Molecular Biology

Year:

1992

Language:

english

File:

PDF, 1.20 MB

english, 1992

48

Base-analog-induced aminoacylation of an RNA helix by a tRNA synthetase

Musier-Forsyth, Karin, Shi, J.-P., Henderson, Barry, Bald, Rolf, Fuerste, Jens Peter, Erdmann, Volker A., Schimmel, Paul

Journal:

Journal of the American Chemical Society

Year:

1995

Language:

english

File:

PDF, 652 KB

english, 1995

49

Evidence for Non-Two-State Kinetics in the Nucleocapsid Protein Chaperoned Opening of DNA Hairpins

Cosa, Gonzalo, Zeng, Yining, Liu, Hsiao-Wei, Landes, Christy F., Makarov, Dmitrii E., Musier-Forsyth, Karin, Barbara, Paul F.

Journal:

Journal of Physical Chemistry B

Year:

2006

Language:

english

File:

PDF, 230 KB

english, 2006

50

Molecular recognition of tRNA Pro by Escherichia coli proline tRNA synthetase in vitro

Liu, Hongjian, Peterson, Richard, Kessler, Jason, Musier-Forsyth, Karin

Journal:

Nucleic Acids Research

Year:

1995

Language:

english

File:

PDF, 478 KB

english, 1995

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